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  5. GSVIVT01021087001

GSVIVT01021087001 (SPL3)


Aliases : SPL3

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021087001
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.03 OrthoFinder output from all 47 species
Aspi01Gene12656.t1 SPL8, Aspi01Gene12656 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23632.t1 SPL8, Aspi01Gene23632 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40204.t1 Aspi01Gene40204 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61092.t1 SPL8, Aspi01Gene61092 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G034000.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G025600.1 SPL3, Ceric.25G025600 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cre02.g085150 SPL4 RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Cre16.g673250 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Dde_g22348 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_32703 SPL10 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g46580.1 SPL3, LOC_Os04g46580 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Msp_g03985 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41765 SPL5 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47425 SPL3 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020524 SPL2 SBP-type transcription factor & original description: CDS=1-1641 0.02 OrthoFinder output from all 47 species
Solyc07g062980.4.1 SPL3, Solyc07g062980 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Solyc10g078700.3.1 AtSPL9, SPL9,... transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e003546_P002 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e010443_P001 SPL5, Zm00001e010443 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e013795_P002 SPL8, Zm00001e013795 transcription factor (SBP) 0.08 OrthoFinder output from all 47 species
Zm00001e018817_P003 SPL13, SPL13A,... transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e025110_P001 SPL8, Zm00001e025110 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e030416_P001 SPL8, Zm00001e030416 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e034537_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e034628_P001 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e041526_P001 SPL3, Zm00001e041526 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 56 129
No external refs found!