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  5. GSVIVT01021167001

GSVIVT01021167001 (TCP3)


Aliases : TCP3

Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021167001
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT1G30210 ATTCP24, TCP24 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 0.04 OrthoFinder output from all 47 species
Aev_g30836 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28173 TCP2 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22409 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008109001 TCP5 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
GSVIVT01011962001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.05 OrthoFinder output from all 47 species
Gb_36354 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g11550.1 TCP4, MEE35,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
LOC_Os03g49880.1 TCP12, BRC2,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Ore_g04093 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33965 TCP10 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g089830.2.1 TCP1, Solyc02g089830 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc10g008780.1.1 TCP10, Solyc10g008780 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e009811_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 66 151
No external refs found!