GSVIVT01021269001 (HSF A4A, AT-HSFA4A)

Aliases : HSF A4A, AT-HSFA4A

Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01021269001
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00264800	AT-HSFA7A,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
AMTR_s00040p00209530	HSFA1E,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
AMTR_s00132p00118400	HSF4, HSFB1,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
AT1G67970	HSFA8, AT-HSFA8	heat shock transcription factor A8	0.03	OrthoFinder output from all 47 species
AT5G62020	AT-HSFB2A, HSFB2A	heat shock transcription factor B2A	0.03	OrthoFinder output from all 47 species
Ala_g06411	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0116.g046398	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=1-1350	0.04	OrthoFinder output from all 47 species
Azfi_s0672.g081792	HSF4, HSFB1,...	HSF-type transcription factor & original description: CDS=1-651	0.03	OrthoFinder output from all 47 species
Ceric.15G065200.1	HSFA1E,...	HSF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.15G074700.1	HSFB4, SCZ,...	HSF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g03864	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01015389001	AT-HSFC1, HSFC1	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
LOC_Os02g29340.1	AT-HSFA5, HSFA5,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os02g32590.1	HSFA3, AT-HSFA3,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
LOC_Os03g12370.1	HSFA1B, ATHSF3,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Len_g10124	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g03202	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g27595	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
MA_10293408g0010	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.05	OrthoFinder output from all 47 species
MA_5374g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Msp_g24815	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g32244	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g40245	No alias	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g006000.3.1	HSF A4A,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Solyc08g076590.3.1	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.03	OrthoFinder output from all 47 species
Solyc12g007070.2.1	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Spa_g11248	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g26714	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e005982_P001	AT-HSFA6B,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Zm00001e027464_P001	HSF A4A,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Zm00001e029052_P001	HSFA4C, RHA1,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	14	103

External Links

No external refs found!

GSVIVT01021269001 (HSF A4A, AT-HSFA4A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation