Aliases : RPN5B
Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component
Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G09900 | EMB2107, MSA, RPN5A | 26S proteasome regulatory subunit, putative (RPN5) | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g13431 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0081.g038574 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z048700.1 | RPN5B, Ceric.1Z048700 | regulatory component *(RPN5) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021348.57 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.03 | OrthoFinder output from all 47 species | |
| Cre14.g632775 | RPN5B | Protein degradation.26S proteasome.regulatory... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_00178 | EMB2107, MSA, RPN5A | regulatory component RPN5 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g63430.1 | RPN5B, LOC_Os03g63430 | regulatory component RPN5 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species | |
| MA_10435598g0010 | EMB2107, MSA, RPN5A | regulatory component RPN5 of 26S proteasome | 0.05 | OrthoFinder output from all 47 species | |
| Mp6g06620.1 | RPN5B | regulatory component RPN5 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g37416 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11859 | No alias | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24935 | No alias | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g051370.4.1 | RPN5B, Solyc04g051370 | regulatory component RPN5 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g01849 | RPN5B | regulatory component *(RPN5) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011647_P002 | RPN5B, Zm00001e011647 | regulatory component RPN5 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000717 | PCI_dom | 308 | 417 |
| No external refs found! |
