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  5. GSVIVT01022281001

GSVIVT01022281001


Description : 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022281001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G09880 No alias Splicing factor, CC1-like 0.03 OrthoFinder output from all 47 species
Adi_g075755 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g06965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0162.g054145 No alias not classified & original description: CDS=1-1809 0.03 OrthoFinder output from all 47 species
Cba_g36170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G027600.1 Ceric.27G027600 not classified & original description: pacid=50605291... 0.04 OrthoFinder output from all 47 species
Ceric.33G026000.1 Ceric.33G026000 not classified & original description: pacid=50607594... 0.04 OrthoFinder output from all 47 species
Cre04.g213905 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_10430689g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g19710.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g15339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 237 306
IPR000504 RRM_dom 139 202
IPR029123 RBM39_linker 327 427
No external refs found!