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  5. GSVIVT01022410001

GSVIVT01022410001


Description : MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana


Gene families : OG0000861 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000861_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022410001
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00141350 evm_27.TU.AmTr_v1... MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G14780 No alias MAC/Perforin domain-containing protein 0.06 OrthoFinder output from all 47 species
AT1G28380 NSL1 MAC/Perforin domain-containing protein 0.04 OrthoFinder output from all 47 species
AT1G29690 CAD1 MAC/Perforin domain-containing protein 0.04 OrthoFinder output from all 47 species
Als_g15849 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Aop_g00734 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Aop_g04516 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.05 OrthoFinder output from all 47 species
Cba_g37681 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.05 OrthoFinder output from all 47 species
Ceric.11G074000.1 Ceric.11G074000 not classified & original description: pacid=50595318... 0.04 OrthoFinder output from all 47 species
Dac_g01669 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.04 OrthoFinder output from all 47 species
Dde_g02317 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.05 OrthoFinder output from all 47 species
Dde_g11638 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Ehy_g05984 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06909 CAD1 regulatory protein *(CAD1) of Programmed Cell Death &... 0.06 OrthoFinder output from all 47 species
Gb_07458 No alias MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_16359 CAD1 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os01g54510.1 CAD1, LOC_Os01g54510 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g27480.1 LOC_Os02g27480 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os02g50340.1 LOC_Os02g50340 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g14050.1 LOC_Os06g14050 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10436626g0030 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10959g0010 CAD1 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_18870g0010 No alias MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g01172 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Msp_g27088 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Pir_g09718 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Pir_g11770 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.04 OrthoFinder output from all 47 species
Ppi_g06926 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.02 OrthoFinder output from all 47 species
Solyc01g005220.3.1 Solyc01g005220 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g103490.3.1 Solyc01g103490 MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc02g071780.3.1 CAD1, Solyc02g071780 MACPF domain-containing protein CAD1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc02g077780.3.1 NSL1, Solyc02g077780 MACPF domain-containing protein NSL1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g048950.4.1 Solyc04g048950 MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc09g098070.3.1 Solyc09g098070 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g02756 No alias regulatory protein *(CAD1) of Programmed Cell Death &... 0.03 OrthoFinder output from all 47 species
Zm00001e014559_P002 Zm00001e014559 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e015755_P005 Zm00001e015755 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e022542_P001 Zm00001e022542 MACPF domain-containing protein At1g14780 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e028292_P001 Zm00001e028292 MACPF domain-containing protein At4g24290 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004592 pantoate-beta-alanine ligase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020864 MACPF 107 315
No external refs found!