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  5. GSVIVT01022425001

GSVIVT01022425001


Description : Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022425001

Target Alias Description ECC score Gene Family Method Actions
AT1G21380 No alias Target of Myb protein 1 0.03 OrthoFinder output from all 47 species
AT1G76970 No alias Target of Myb protein 1 0.03 OrthoFinder output from all 47 species
Aev_g49155 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36589 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01820 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G081800.1 Ceric.16G081800 ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g10821 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07022 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g27320.2 LOC_Os05g27320 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
LOC_Os05g39760.1 LOC_Os05g39760 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
MA_18331g0030 No alias TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
Nbi_g00825 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007586 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g07312 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g063280.3.1 Solyc04g063280 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Spa_g06704 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10790 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11822 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14065 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021369_P002 Zm00001e021369 TOM endomembrane trafficking associated protein 0.09 OrthoFinder output from all 47 species
Zm00001e029150_P001 Zm00001e029150 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
Zm00001e031902_P001 Zm00001e031902 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002014 VHS_dom 5 113
IPR004152 GAT_dom 192 265
No external refs found!