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  5. GSVIVT01022885001

GSVIVT01022885001 (MATK)


Aliases : MATK

Description : RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.MatK maturase


Gene families : OG0009239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022885001
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
ATCG00040 MATK maturase K 0.11 OrthoFinder output from all 47 species
Aev_g12869 MATK maturase *(MatK) & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g16220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77943 No alias maturase *(MatK) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G011900.1 Ceric.02G011900 not classified & original description: pacid=50586159... 0.03 OrthoFinder output from all 47 species
Ceric.1Z023400.1 Ceric.1Z023400 not classified & original description: pacid=50586366... 0.05 OrthoFinder output from all 47 species
Ceric.1Z116700.1 Ceric.1Z116700 not classified & original description: pacid=50576996... 0.05 OrthoFinder output from all 47 species
Gb_01780 MATK maturase (MatK) 0.1 OrthoFinder output from all 47 species
LOC_Os04g16734.1 MATK, LOC_Os04g16734 maturase (MatK) 0.07 OrthoFinder output from all 47 species
Lfl_g12823 MATK maturase *(MatK) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01567 MATK maturase *(MatK) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g14902 MATK not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR024942 Maturase_MatK_N 1 124
IPR024942 Maturase_MatK_N 125 167
IPR024937 Domain_X 195 311
No external refs found!