GSVIVT01022966001


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.p24-delta regulator protein


Gene families : OG0001151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001151_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022966001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00267730 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
AT1G57620 No alias emp24/gp25L/p24 family/GOLD family protein 0.05 OrthoFinder output from all 47 species
Adi_g011270 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Cba_g04407 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Cba_g06310 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Ceric.22G052800.1 Ceric.22G052800 component *(p24-delta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000821.8 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dac_g03551 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Gb_08117 No alias p24-delta COPI trafficking regulator protein 0.06 OrthoFinder output from all 47 species
Gb_13296 No alias p24-delta COPI trafficking regulator protein 0.04 OrthoFinder output from all 47 species
LOC_Os02g52920.1 LOC_Os02g52920 p24-delta COPI trafficking regulator protein 0.04 OrthoFinder output from all 47 species
Msp_g10335 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.05 OrthoFinder output from all 47 species
Pir_g47371 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004458 No alias component *(p24-delta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Smo115428 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Smo74858 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Solyc04g005570.4.1 Solyc04g005570 p24-delta COPI trafficking regulator protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR009038 GOLD_dom 6 187
No external refs found!