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  5. GSVIVT01022979001

GSVIVT01022979001


Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022979001
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AT3G25505 No alias No description available 0.03 OrthoFinder output from all 47 species
Aob_g37569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026001001 No alias External stimuli response.biotic stress.pathogen... 0.07 OrthoFinder output from all 47 species
GSVIVT01029009001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01036294001 No alias External stimuli response.biotic stress.pathogen... 0.06 OrthoFinder output from all 47 species
GSVIVT01036405001 No alias External stimuli response.biotic stress.pathogen... 0.07 OrthoFinder output from all 47 species
GSVIVT01037180001 No alias External stimuli response.biotic stress.pathogen... 0.06 OrthoFinder output from all 47 species
GSVIVT01037221001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.09 OrthoFinder output from all 47 species
Gb_09783 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_10426286g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_408380g0010 No alias effector receptor (NLR) 0.06 OrthoFinder output from all 47 species
MA_90690g0020 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_9394663g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Pir_g47005 No alias effector receptor *(NLR) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g50960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g055380.1.1 Solyc07g055380 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc07g055390.1.1 Solyc07g055390 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000157 TIR_dom 20 194
IPR002182 NB-ARC 212 306
No external refs found!