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  5. GSVIVT01023028001

GSVIVT01023028001


Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023028001
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G17600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT1G17610 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G31540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G56520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G72930 TIR toll/interleukin-1 receptor-like 0.04 OrthoFinder output from all 47 species
AT2G16870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.05 OrthoFinder output from all 47 species
AT3G44480 cog1, RPP1 Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G36930 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT5G46260 No alias disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Dde_g12052 RPS4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004877001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01025968001 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01026098001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01026099001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01037162001 No alias Probable WRKY transcription factor 19 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_03483 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pir_g34042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g48346 No alias effector receptor *(NLR) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g007710.3.1 Solyc09g007710 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 24 185
IPR002182 NB-ARC 200 435
No external refs found!