1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01023785001

GSVIVT01023785001 (RD2)


Aliases : RD2

No description available


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023785001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00074810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g36147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06810 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g66074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0154.g053494 No alias not classified & original description: CDS=419-901 0.03 OrthoFinder output from all 47 species
Ehy_g02307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_02091 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g06500.1 LOC_Os05g06500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g09505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09982 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431018g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_25267g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g10800.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g10963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022124 No alias not classified & original description: CDS=790-1359 0.04 OrthoFinder output from all 47 species
Sam_g17800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g086670.2.1 Solyc10g086670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g09948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006658 phosphatidylserine metabolic process IEP HCCA
BP GO:0006659 phosphatidylserine biosynthetic process IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 41 168
No external refs found!