GSVIVT01023857001 (ATEXPA20, ATEXP20,...)


Aliases : ATEXPA20, ATEXP20, EXPA20, EXP20, ATHEXP ALPHA 1.23

Description : Cell wall.cell wall proteins.expansins.alpha-type expansin


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023857001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00103570 ATEXPA4, ATEXP4,... Expansin-A4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Adi_g010993 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27552 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008762001 ATEXPA11, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
MA_10427897g0010 EXPB3, ATEXPB3,... beta-class expansin 0.04 OrthoFinder output from all 47 species
Mp3g12300.2 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Pp3c7_25830V3.1 EXPB3, ATEXPB3,... expansin B3 0.01 OrthoFinder output from all 47 species
Solyc03g115890.3.1 EXP15, ATEXPA15,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Zm00001e002274_P001 ATHEXP BETA 1.4,... Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 343.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 159 235
IPR009009 RlpA-like_DPBB 62 148
No external refs found!