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  5. GSVIVT01024041001

GSVIVT01024041001


No description available


Gene families : OG0000514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024041001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00141920 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00111920 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G48060 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 OrthoFinder output from all 47 species
Adi_g107871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47750 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ala_g20600 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Als_g33736 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Als_g62378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03624 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Aop_g03551 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13012.t1 Aspi01Gene13012 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0124.g048462 No alias not classified & original description: CDS=36-3404 0.04 OrthoFinder output from all 47 species
Azfi_s0276.g061462 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Cba_g14471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G029300.1 Ceric.02G029300 not classified & original description: pacid=50584188... 0.05 OrthoFinder output from all 47 species
Ceric.11G079200.1 Ceric.11G079200 not classified & original description: pacid=50595155... 0.05 OrthoFinder output from all 47 species
Ceric.24G078000.1 Ceric.24G078000 regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Cre06.g292650 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_02775 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_05084 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_05690 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g50840.2 LOC_Os02g50840 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g50850.2 LOC_Os02g50850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g42490.1 LOC_Os06g42490 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10428034g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_33300g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g15696 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Nbi_g04481 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Ore_g25799 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ore_g35771 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Pir_g13634 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Pnu_g31632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41929 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005145 No alias not classified & original description: CDS=1-3426 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018052 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Sam_g10559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29218 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Solyc03g114060.3.1 Solyc03g114060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g089320.3.1 Solyc12g089320 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g09113 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Zm00001e002441_P003 Zm00001e002441 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e013353_P001 Zm00001e013353 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e037792_P001 Zm00001e037792 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e037793_P001 Zm00001e037793 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 101 148
No external refs found!