GSVIVT01024096001

Description : Putative disease resistance protein At1g59780 OS=Arabidopsis thaliana

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01024096001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00205330	evm_27.TU.AmTr_v1...	Probable disease resistance RPP8-like protein 2...	0.02	OrthoFinder output from all 47 species
AMTR_s00061p00205780	evm_27.TU.AmTr_v1...	Putative disease resistance RPP13-like protein 3...	0.03	OrthoFinder output from all 47 species
AT3G46710	No alias	NB-ARC domain-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
LOC_Os02g09790.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os11g13440.1	LOC_Os11g13440	no description available(sp\|q2r8l1\|rga5s_orysj : 304.0)	0.04	OrthoFinder output from all 47 species
LOC_Os11g17330.1	LOC_Os11g17330	no description available(sp\|q2r8l1\|rga5s_orysj : 391.0)	0.03	OrthoFinder output from all 47 species
LOC_Os12g17420.1	RPM1, RPS3,...	no description available(sp\|q2r8l1\|rga5s_orysj : 165.0)	0.03	OrthoFinder output from all 47 species
Solyc07g039420.1.1	RPP13, Solyc07g039420	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Solyc08g005440.3.1	RPM1, RPS3,...	RPM1 effector-triggered immunity CC-NLR-type effector receptor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	1	98

External Links

No external refs found!