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  5. GSVIVT01024859001

GSVIVT01024859001


Description : Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT4 protease


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024859001
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cba_g53611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G026500.1 Ceric.23G026500 protease *(SBT2) & original description: pacid=50611529... 0.04 OrthoFinder output from all 47 species
Dcu_g12743 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006968001 AIR3 Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder output from all 47 species
Gb_39302 SLP3 protease (SBT2) 0.04 OrthoFinder output from all 47 species
Len_g41492 ARA12 protease *(SBT1) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10301477g0010 AIR3 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_734639g0010 ARA12 protease (SBT1) 0.05 OrthoFinder output from all 47 species
Msp_g32301 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06264 AIR3 protease *(SBT5) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17535 No alias protease *(SBT1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61573 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016128 AIR3 not classified & original description: CDS=1-2142 0.02 OrthoFinder output from all 47 species
Smo425828 ATSBT5.4, SBT5.4 Subtilisin-like protease SBT5.4 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Solyc08g007600.2.1 Solyc08g007600 Subtilisin-like protease SBT1.8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g079860.2.1 ARA12, Solyc08g079860 Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
InterPro domains Description Start Stop
IPR000209 Peptidase_S8/S53_dom 102 527
IPR010259 S8pro/Inhibitor_I9 3 79
No external refs found!