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  5. GSVIVT01025179001

GSVIVT01025179001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025179001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00182780 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G37950 No alias RING/FYVE/PHD zinc finger superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G09760 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g06591 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33633 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15074 No alias E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0059.g034655 No alias not classified & original description: CDS=1081-1965 0.04 OrthoFinder output from all 47 species
Ceric.06G036800.1 Ceric.06G036800 not classified & original description: pacid=50620077... 0.03 OrthoFinder output from all 47 species
Ceric.15G009300.1 Ceric.15G009300 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Pir_g14219 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06087 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018968 No alias bHLH-type transcription factor & original description: CDS=1-675 0.02 OrthoFinder output from all 47 species
Zm00001e031805_P001 Zm00001e031805 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 104 151
No external refs found!