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  5. GSVIVT01025198001

GSVIVT01025198001 (ARF10)


Aliases : ARF10

Description : RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025198001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00141830 HSS, ARF1-BP,... RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
AT2G33860 ARF3, ETT Transcriptional factor B3 family protein /... 0.02 OrthoFinder output from all 47 species
AT5G60450 ARF4 auxin response factor 4 0.03 OrthoFinder output from all 47 species
Adi_g001040 ARF11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089250 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098002 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22075 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33211 ARF16 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013413 ARF10 ARF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0384.g067487 ARF8, ATARF8 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g08691 ARF6 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g14113 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22354 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016266001 ARF16 Auxin response factor 18 OS=Oryza sativa subsp. japonica 0.07 OrthoFinder output from all 47 species
GSVIVT01021552001 ARF6 RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
GSVIVT01023149001 ARF1 RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
Gb_39685 ARF6 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Gb_39686 ARF6 transcription factor (ARF) 0.01 OrthoFinder output from all 47 species
LOC_Os04g36054.1 ARF1, LOC_Os04g36054 transcription factor (ARF) 0.06 OrthoFinder output from all 47 species
LOC_Os04g56850.1 MP, IAA24, ARF5,... transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
LOC_Os12g29520.1 HSS, ARF1-BP,... transcription factor (ARF) 0.06 OrthoFinder output from all 47 species
LOC_Os12g41950.1 ARF6, LOC_Os12g41950 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Pir_g33451 ARF10 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19455 ARF6 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019239 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: CDS=1-3375 0.01 OrthoFinder output from all 47 species
Sam_g40110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49898 No alias ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26009 ARF6 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g29160 ARF16 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039552_P004 HSS, ARF1-BP,... transcription factor (ARF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010525 ARF_dom 162 245
IPR003340 B3_DNA-bd 56 137
No external refs found!