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  5. GSVIVT01025208001

GSVIVT01025208001 (CNGC15, ATCNGC15)


Aliases : CNGC15, ATCNGC15

Description : Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type)


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025208001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00152360 ATCNGC17,... Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00073630 CNGC15,... Solute transport.channels.VIC superfamily.cyclic... 0.02 OrthoFinder output from all 47 species
AMTR_s00177p00063110 DND1, ATCNGC2,... Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
AMTR_s00210p00019190 CNGC5, ATCNGC5,... Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
AT1G01340 ATCNGC10, CNGC10, ACBK1 cyclic nucleotide gated channel 10 0.03 OrthoFinder output from all 47 species
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.03 OrthoFinder output from all 47 species
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.06 OrthoFinder output from all 47 species
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.04 OrthoFinder output from all 47 species
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.05 OrthoFinder output from all 47 species
AT5G15410 DND1, ATCNGC2, CNGC2 Cyclic nucleotide-regulated ion channel family protein 0.03 OrthoFinder output from all 47 species
AT5G54250 DND2, CNGC4,... cyclic nucleotide-gated cation channel 4 0.03 OrthoFinder output from all 47 species
Ala_g12240 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ala_g13851 ATCNGC14, CNGC14 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Ala_g24844 ATCNGC20, CNGC20, CNBT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33029 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036528 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063721 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Cba_g15401 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ceric.13G070300.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Ceric.23G068600.1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.06 OrthoFinder output from all 47 species
Dac_g05216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07103 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Dac_g20415 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Dac_g37579 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Dcu_g13966 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26407 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g54760.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.05 OrthoFinder output from all 47 species
LOC_Os05g42250.1 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
LOC_Os06g10580.1 ATCNGC20,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
LOC_Os06g33570.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Mp4g11640.1 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel (CNGC) 0.01 OrthoFinder output from all 47 species
Mp6g01920.1 CNGC5, ATCNGC5 cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Msp_g24602 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Nbi_g11227 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Pir_g46569 ATCNGC1, CNGC1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Ppi_g05281 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Sam_g39902 No alias cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Smo84488 DND1, ATCNGC2, CNGC2 Solute transport.channels.VIC superfamily.cyclic... 0.02 OrthoFinder output from all 47 species
Solyc03g098210.4.1 ATCNGC20,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Solyc03g116850.3.1 ATCNGC8, CNGC8,... cyclic nucleotide-gated cation channel (CNGC) 0.05 OrthoFinder output from all 47 species
Solyc05g050350.2.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.06 OrthoFinder output from all 47 species
Solyc05g050360.3.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.06 OrthoFinder output from all 47 species
Solyc05g050380.4.1 ATCNGC13,... cyclic nucleotide-gated cation channel (CNGC) 0.05 OrthoFinder output from all 47 species
Solyc10g006800.4.1 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc11g069580.2.1 CNGC15,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Solyc12g010010.2.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Tin_g03478 ATCNGC8, CNGC8 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Zm00001e012009_P001 DND1, ATCNGC2,... cyclic nucleotide-gated cation channel (CNGC).... 0.03 OrthoFinder output from all 47 species
Zm00001e036286_P001 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 91 410
No external refs found!