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  5. GSVIVT01025408001

GSVIVT01025408001


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.xylogen-type arabinogalactan protein


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025408001

Target Alias Description ECC score Gene Family Method Actions
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 OrthoFinder output from all 47 species
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 OrthoFinder output from all 47 species
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 OrthoFinder output from all 47 species
Adi_g116254 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0007.g010617 No alias not classified & original description: CDS=72-464 0.01 OrthoFinder output from all 47 species
Azfi_s0054.g033619 No alias not classified & original description: CDS=1-465 0.01 OrthoFinder output from all 47 species
Azfi_s0204.g057707 No alias not classified & original description: CDS=495-1133 0.01 OrthoFinder output from all 47 species
Ehy_g06369 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_01917 No alias classical arabinogalactan protein 0.01 OrthoFinder output from all 47 species
Gb_02441 No alias xylogen-type arabinogalactan protein 0.01 OrthoFinder output from all 47 species
Gb_02443 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_02454 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Gb_02458 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_06123 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_06428 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_08579 No alias xylogen-type arabinogalactan protein 0.01 OrthoFinder output from all 47 species
Gb_24349 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_28256 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Gb_33141 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os07g07930.1 LOC_Os07g07930 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os11g37280.1 LOC_Os11g37280 Non-specific lipid-transfer protein C6 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_115537g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g28322 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04354 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g30807 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014600 No alias not classified & original description: CDS=65-802 0.02 OrthoFinder output from all 47 species
Zm00001e028880_P001 Zm00001e028880 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 9 94
No external refs found!