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  5. GSVIVT01025663001

GSVIVT01025663001 (ATFLA11, FLA11)


Aliases : ATFLA11, FLA11

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0000997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000997_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025663001
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT2G20520 FLA6 FASCICLIN-like arabinogalactan 6 0.03 OrthoFinder output from all 47 species
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.03 OrthoFinder output from all 47 species
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.03 OrthoFinder output from all 47 species
Adi_g052058 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52617 FLA12 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Aop_g01653 SOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20860 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g32906 FLA9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g41611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01638 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G007500.1 ATFLA11, FLA11,... not classified & original description: pacid=50602063... 0.02 OrthoFinder output from all 47 species
Ceric.28G027400.1 FLA7, Ceric.28G027400 not classified & original description: pacid=50570668... 0.03 OrthoFinder output from all 47 species
Ceric.39G038300.1 ATFLA11, FLA11,... not classified & original description: pacid=50582633... 0.03 OrthoFinder output from all 47 species
GSVIVT01020616001 FLA9 Cell wall.cell wall proteins.hydroxyproline-rich... 0.09 OrthoFinder output from all 47 species
GSVIVT01025660001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01025671001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
LOC_Os01g06580.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os02g20540.1 FLA6, LOC_Os02g20540 fasciclin-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
LOC_Os02g20560.1 FLA9, LOC_Os02g20560 fasciclin-type arabinogalactan protein 0.08 OrthoFinder output from all 47 species
LOC_Os04g39600.1 FLA7, LOC_Os04g39600 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os05g48890.1 FLA9, LOC_Os05g48890 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os05g48900.1 FLA13, LOC_Os05g48900 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os09g30486.1 FLA7, LOC_Os09g30486 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Len_g06167 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60593 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g075220.1.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc07g053540.1.1 FLA9, Solyc07g053540 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g007650.3.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g007660.1.1 FLA12, Solyc09g007660 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc11g069250.2.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Spa_g09857 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13713 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010053_P001 FLA7, Zm00001e010053 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e016840_P001 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e024743_P001 FLA6, Zm00001e024743 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e027481_P001 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 65 197
No external refs found!