GSVIVT01025877001

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01025877001
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00238210	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g14610...	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00088510	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00101p00133980	RFL1,...	Disease resistance protein RFL1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00121p00125720	evm_27.TU.AmTr_v1...	Probable disease resistance protein At1g61180...	0.03	OrthoFinder output from all 47 species
AT5G47260	No alias	ATP binding;GTP binding;nucleotide...	0.03	OrthoFinder output from all 47 species
Adi_g042385	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g074819	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g14067	RPS5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Gb_37091	No alias	Probable disease resistance protein At1g15890...	0.03	OrthoFinder output from all 47 species
LOC_Os09g14100.1	RPS2, LOC_Os09g14100	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os11g36410.1	RPS5, LOC_Os11g36410	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10432620g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_562728g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp3g09210.1	No alias	Probable disease resistance protein At4g27220...	0.03	OrthoFinder output from all 47 species
Solyc06g048910.2.1	Solyc06g048910	Disease resistance protein At4g27190 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e019557_P001	Zm00001e019557	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	453	614
IPR002182	NB-ARC	227	453

External Links

No external refs found!

GSVIVT01025877001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation