No description available
Gene families : OG0000982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000982_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01026222001 | |
| Cluster | HCCA: Cluster_53 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00044p00016810 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AT1G31310 | No alias | hydroxyproline-rich glycoprotein family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT2G35640 | No alias | Homeodomain-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g108528 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34208.t1 | Aspi01Gene34208 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene72091.t1 | Aspi01Gene72091 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G010900.1 | Ceric.27G010900 | not classified & original description: pacid=50605753... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16918 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g13084 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g46350.1 | LOC_Os03g46350 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os04g57530.1 | LOC_Os04g57530 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Len_g09419 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_174370g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_174370g0020 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g17787 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g004979 | No alias | not classified & original description: CDS=1-1278 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0041.g012571 | No alias | not classified & original description: CDS=1-1461 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g030460.2.1 | Solyc02g030460 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc02g069390.2.1 | Solyc02g069390 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g15445 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e006592_P002 | Zm00001e006592 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012318_P001 | Zm00001e012318 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
