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  5. GSVIVT01026725001

GSVIVT01026725001


Description : Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026725001
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00097500 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00057720 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00090p00087950 RPP13,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00090p00137350 RPP13,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G58390 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.08 OrthoFinder output from all 47 species
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G58807 No alias Disease resistance protein (CC-NBS-LRR class) family 0.07 OrthoFinder output from all 47 species
AT1G58848 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G59124 No alias Disease resistance protein (CC-NBS-LRR class) family 0.07 OrthoFinder output from all 47 species
AT1G59218 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.1 OrthoFinder output from all 47 species
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.04 OrthoFinder output from all 47 species
Adi_g060852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g062378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31795 RPP13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60132 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.29 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
GSVIVT01012167001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01032830001 No alias Probable disease resistance RPP8-like protein 2... 0.04 OrthoFinder output from all 47 species
Gb_25815 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.06 OrthoFinder output from all 47 species
Gb_35026 ZAR1 Disease resistance protein RPP8 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_40740 RPM1, RPS3 Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os08g07920.1 LOC_Os08g07920 no description available(sp|q2qzf1|pik6_orysj : 119.0) 0.03 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g12320.1 ZAR1, LOC_Os11g12320 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g17330.1 LOC_Os11g17330 no description available(sp|q2r8l1|rga5s_orysj : 391.0) 0.03 OrthoFinder output from all 47 species
LOC_Os12g17430.1 LOC_Os12g17430 no description available(sp|p0do08|pikm2_orysj : 108.0) 0.07 OrthoFinder output from all 47 species
LOC_Os12g37770.1 LOC_Os12g37770 no description available(sp|f7j0n2|rga5r_orysj : 437.0) 0.06 OrthoFinder output from all 47 species
Pir_g31525 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Solyc02g084890.3.1 ZAR1, Solyc02g084890 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc03g005650.1.1 Solyc03g005650 Probable disease resistance protein At1g58390... 0.03 OrthoFinder output from all 47 species
Solyc03g005670.3.1 Solyc03g005670 Disease resistance RPP8-like protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g009250.1.1 RPP13, Solyc04g009250 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g008220.4.1 Solyc10g008220 Putative late blight resistance protein homolog R1A-6... 0.04 OrthoFinder output from all 47 species
Zm00001e011204_P001 Zm00001e011204 no description available(sp|q2r8l1|rga5s_orysj : 371.0) 0.03 OrthoFinder output from all 47 species
Zm00001e013150_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e029265_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 135 188
No external refs found!