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  5. GSVIVT01026747001

GSVIVT01026747001


Description : Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026747001
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00205330 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.03 OrthoFinder output from all 47 species
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT1G58807 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G59124 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.07 OrthoFinder output from all 47 species
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.08 OrthoFinder output from all 47 species
Aop_g60132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.29 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
GSVIVT01012165001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01012167001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01024099001 No alias Putative disease resistance protein At1g50180... 0.04 OrthoFinder output from all 47 species
GSVIVT01024101001 RPP13 Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01024102001 RPP13 Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01026750001 HRT, RCY1, RPP8 Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.13 OrthoFinder output from all 47 species
GSVIVT01026910001 No alias Inactive disease susceptibility protein LOV1... 0.03 OrthoFinder output from all 47 species
Gb_10845 LOV1 Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_25799 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_25803 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Gb_35026 ZAR1 Disease resistance protein RPP8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g07920.1 LOC_Os08g07920 no description available(sp|q2qzf1|pik6_orysj : 119.0) 0.02 OrthoFinder output from all 47 species
LOC_Os09g09490.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g16470.2 LOC_Os11g16470 no description available(sp|q2r8l1|rga5s_orysj : 400.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g16510.1 LOC_Os11g16510 no description available(sp|p0do08|pikm2_orysj : 87.0) 0.02 OrthoFinder output from all 47 species
LOC_Os12g37760.1 LOC_Os12g37760 no description available(sp|p0do08|pikm2_orysj : 370.0) 0.04 OrthoFinder output from all 47 species
Pir_g31525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g084890.3.1 ZAR1, Solyc02g084890 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e020947_P001 Zm00001e020947 Putative disease resistance protein RGA4 OS=Solanum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 161 389
No external refs found!