1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01026872001

GSVIVT01026872001


No description available


Gene families : OG0000607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026872001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00207060 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G07220 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.04 OrthoFinder output from all 47 species
AT2G45830 DTA2 downstream target of AGL15 2 0.05 OrthoFinder output from all 47 species
AT3G48980 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.03 OrthoFinder output from all 47 species
AT3G61270 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.04 OrthoFinder output from all 47 species
AT3G61280 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.06 OrthoFinder output from all 47 species
Aop_g18627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66551.t1 Aspi01Gene66551 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026871001 DTA2 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01026877001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026878001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_34471 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_34473 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10425862g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_116478g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_32961g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_4631294g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8962570g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_912717g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9597898g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g39560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo442089 No alias No description available 0.08 OrthoFinder output from all 47 species
Solyc03g025770.4.1 Solyc03g025770 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g076980.4.1 Solyc06g076980 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g02214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024271_P001 Zm00001e024271 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004506 squalene monooxygenase activity IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR006598 CAP10 1 324
No external refs found!