1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01026877001

GSVIVT01026877001


No description available


Gene families : OG0000607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026877001
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00207060 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G07220 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.03 OrthoFinder output from all 47 species
AT2G45830 DTA2 downstream target of AGL15 2 0.06 OrthoFinder output from all 47 species
Aop_g18627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G033100.1 Ceric.22G033100 not classified & original description: pacid=50614921... 0.06 OrthoFinder output from all 47 species
Dac_g13974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026872001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026878001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_34471 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g05690.1 LOC_Os05g05690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g01150.1 LOC_Os08g01150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10425862g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435424g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_4631294g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_55748g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8962570g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_912717g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013004 No alias not classified & original description: CDS=1-807 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013005 No alias not classified & original description: CDS=468-1319 0.03 OrthoFinder output from all 47 species
Smo442089 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g094380.2.1 Solyc01g094380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g025770.4.1 Solyc03g025770 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc05g048800.3.1 Solyc05g048800 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g50265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040430_P002 Zm00001e040430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006598 CAP10 26 419
No external refs found!