1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01027166001

GSVIVT01027166001 (ARF11)


Aliases : ARF11

Description : RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027166001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00168950 HSS, ARF1-BP,... RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
Adi_g061151 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g110090 ARF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11735 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14726 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32730 TIR5, MSG1,... ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51944 ARF19, IAA22, ARF11 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05880.t1 ARF19, IAA22,... ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11427 ARF6 ARF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g17172 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67239 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78264 ARF16 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G054000.1 ARF6, Ceric.35G054000 ARF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g11626 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27083 ARF6 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g12750.1 ARF6 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Pir_g41869 ARF17 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11690 ARF6 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077560.3.1 ARF3, ETT, Solyc02g077560 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Zm00001e003229_P002 ARF6, Zm00001e003229 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Zm00001e006577_P003 ARF8, ATARF8,... transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Zm00001e006640_P002 MP, IAA24, ARF5,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Zm00001e018126_P002 ARF6, Zm00001e018126 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Zm00001e028396_P001 HSS, ARF1-BP,... transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Zm00001e041910_P003 ARF8, ATARF8,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 467 528
IPR033389 AUX/IAA_dom 538 582
IPR010525 ARF_dom 251 330
IPR003340 B3_DNA-bd 125 225
No external refs found!