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  5. GSVIVT01027822001

GSVIVT01027822001


Description : Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana


Gene families : OG0001484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027822001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00036680 evm_27.TU.AmTr_v1... Probable aldo-keto reductase 1 OS=Glycine max 0.03 OrthoFinder output from all 47 species
AT1G04420 No alias NAD(P)-linked oxidoreductase superfamily protein 0.21 OrthoFinder output from all 47 species
Aev_g09139 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21892.t2 Aspi01Gene21892 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0057.g034325 No alias not classified & original description: CDS=1-1113 0.03 OrthoFinder output from all 47 species
Cba_g13165 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001368.10 No alias Probable voltage-gated potassium channel subunit beta... 0.01 OrthoFinder output from all 47 species
Dac_g01567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04575 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_27849 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g41510.1 LOC_Os03g41510 Probable voltage-gated potassium channel subunit beta... 0.05 OrthoFinder output from all 47 species
Len_g12483 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g11367 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_184740g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_44786g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g07940.1 No alias Probable voltage-gated potassium channel subunit beta... 0.02 OrthoFinder output from all 47 species
Mp8g18990.1 No alias Probable voltage-gated potassium channel subunit beta... 0.02 OrthoFinder output from all 47 species
Msp_g10815 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11752 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19934 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30698 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g09470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15671 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017772 No alias not classified & original description: CDS=67-1254 0.09 OrthoFinder output from all 47 species
Sam_g49553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g053600.4.1 Solyc06g053600 Probable voltage-gated potassium channel subunit beta... 0.05 OrthoFinder output from all 47 species
Spa_g16447 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g07887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005118_P002 Zm00001e005118 Probable voltage-gated potassium channel subunit beta... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 76 407
No external refs found!