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  5. GSVIVT01027844001

GSVIVT01027844001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL14 component


Gene families : OG0002098 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027844001
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00164470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder output from all 47 species
AMTR_s00067p00096180 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 OrthoFinder output from all 47 species
AT2G20450 No alias Ribosomal protein L14 0.17 OrthoFinder output from all 47 species
AT4G27090 No alias Ribosomal protein L14 0.2 OrthoFinder output from all 47 species
Adi_g022479 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g111230 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g111231 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aev_g27769 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g21502 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.17 OrthoFinder output from all 47 species
Als_g22154 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g02342 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.23 OrthoFinder output from all 47 species
Aop_g06833 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Azfi_s0046.g030206 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035376 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.14 OrthoFinder output from all 47 species
Cba_g09965 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g71433 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.19G039800.1 Ceric.19G039800 component *(eL14) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Ceric.27G036100.1 Ceric.27G036100 component *(eL14) of large ribosomal-subunit (LSU)... 0.17 OrthoFinder output from all 47 species
Ceric.32G029000.1 Ceric.32G029000 component *(eL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.50 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.33 OrthoFinder output from all 47 species
Cre17.g701200 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.32 OrthoFinder output from all 47 species
Dac_g00245 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dac_g24709 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.26 OrthoFinder output from all 47 species
Dcu_g04314 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.29 OrthoFinder output from all 47 species
Ehy_g00127 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Ehy_g09487 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Gb_21078 No alias component RPL14 of LSU proteome component 0.27 OrthoFinder output from all 47 species
LOC_Os02g40880.1 LOC_Os02g40880 component RPL14 of LSU proteome component 0.31 OrthoFinder output from all 47 species
Len_g32744 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Lfl_g29655 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
MA_10434733g0010 No alias component RPL14 of LSU proteome component 0.13 OrthoFinder output from all 47 species
MA_37009g0010 No alias component RPL14 of LSU proteome component 0.06 OrthoFinder output from all 47 species
MA_99106g0010 No alias component RPL14 of LSU proteome component 0.2 OrthoFinder output from all 47 species
Mp8g17070.1 No alias component RPL14 of LSU proteome component 0.32 OrthoFinder output from all 47 species
Msp_g12121 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Nbi_g01610 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Nbi_g09265 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Ore_g03641 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pir_g09914 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Pp3c15_5860V3.1 Pp3c15_5860 Ribosomal protein L14 0.19 OrthoFinder output from all 47 species
Pp3c24_20890V3.1 Pp3c24_20890 Ribosomal protein L14 0.23 OrthoFinder output from all 47 species
Pp3c8_25050V3.1 Pp3c8_25050 Ribosomal protein L14 0.03 OrthoFinder output from all 47 species
Ppi_g04804 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g27765 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g11819 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.17 OrthoFinder output from all 47 species
Sam_g31107 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g38083 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.19 OrthoFinder output from all 47 species
Smo403602 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 OrthoFinder output from all 47 species
Solyc06g008260.3.1 Solyc06g008260 component RPL14 of LSU proteome component 0.32 OrthoFinder output from all 47 species
Solyc06g083820.3.1 Solyc06g083820 component RPL14 of LSU proteome component 0.15 OrthoFinder output from all 47 species
Solyc09g066430.3.1 Solyc09g066430 component RPL14 of LSU proteome component 0.38 OrthoFinder output from all 47 species
Spa_g10974 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.19 OrthoFinder output from all 47 species
Spa_g16062 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.23 OrthoFinder output from all 47 species
Spa_g16063 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.25 OrthoFinder output from all 47 species
Spa_g23759 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Spa_g28088 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.17 OrthoFinder output from all 47 species
Tin_g13393 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.2 OrthoFinder output from all 47 species
Zm00001e010296_P001 Zm00001e010296 component RPL14 of LSU proteome component 0.32 OrthoFinder output from all 47 species
Zm00001e034932_P003 Zm00001e034932 component RPL14 of LSU proteome component 0.41 OrthoFinder output from all 47 species
Zm00001e041233_P002 Zm00001e041233 component RPL14 of LSU proteome component 0.34 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002784 Ribosomal_L14e_dom 131 203
No external refs found!