GSVIVT01027891001


Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027891001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00083440 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G13224 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 OrthoFinder output from all 47 species
Adi_g012805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102181 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g112695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0288.g063213 No alias not classified & original description: CDS=60-1199 0.03 OrthoFinder output from all 47 species
Cba_g15473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g048030.4.1 Solyc07g048030 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g09961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04592 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e037155_P004 Zm00001e037155 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 112 171
IPR000504 RRM_dom 8 75
No external refs found!