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  5. GSVIVT01028243001

GSVIVT01028243001


Description : Chitinase 10 OS=Oryza sativa subsp. japonica


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028243001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243300 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.08 OrthoFinder output from all 47 species
AMTR_s00001p00243570 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.07 OrthoFinder output from all 47 species
AMTR_s00001p00243680 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica 0.08 OrthoFinder output from all 47 species
AMTR_s00001p00243780 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.06 OrthoFinder output from all 47 species
AMTR_s00066p00199730 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT1G02360 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
AT2G43570 CHI chitinase, putative 0.06 OrthoFinder output from all 47 species
AT2G43590 No alias Chitinase family protein 0.05 OrthoFinder output from all 47 species
AT2G43620 No alias Chitinase family protein 0.05 OrthoFinder output from all 47 species
AT3G47540 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.04 OrthoFinder output from all 47 species
AT4G01700 No alias Chitinase family protein 0.06 OrthoFinder output from all 47 species
Aev_g02874 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38872 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23821.t1 ATEP3, EP3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32076.t1 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32079.t1 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32081.t1 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32082.t1 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32113.t1 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000740 No alias not classified & original description: CDS=1-501 0.06 OrthoFinder output from all 47 species
Azfi_s0001.g000767 ATEP3, EP3,... not classified & original description: CDS=1-1005 0.04 OrthoFinder output from all 47 species
Dcu_g25280 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21647 HCHIB, B-CHI,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01007191001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01038116001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01038126001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_03376 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_20766 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_20767 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_29991 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_34557 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os01g18400.1 LOC_Os01g18400 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os02g39330.1 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os04g09390.1 LOC_Os04g09390 Lectin OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os04g41620.1 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os04g41640.1 LOC_Os04g41640 Chitinase 4 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os04g41680.1 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os06g51050.1 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os06g51060.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_102538g0010 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 100.0) 0.03 OrthoFinder output from all 47 species
MA_10427514g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10431378g0010 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_10435326g0010 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_10435326g0020 ATEP3, EP3,... no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_1327504g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18470g0020 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.03 OrthoFinder output from all 47 species
MA_191308g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_381956g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_448160g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_4970836g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5029466g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_530083g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_741127g0010 No alias Endochitinase At2g43610 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_853077g0010 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_8921185g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.05 OrthoFinder output from all 47 species
MA_8960362g0010 HCHIB, B-CHI,... Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 81.6) 0.05 OrthoFinder output from all 47 species
Mp2g24410.1 HCHIB, B-CHI,... Endochitinase CH25 OS=Brassica napus... 0.05 OrthoFinder output from all 47 species
Mp5g21830.1 HCHIB, B-CHI,... Endochitinase CH25 OS=Brassica napus... 0.03 OrthoFinder output from all 47 species
Nbi_g23741 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008764 ATEP3, EP3,... not classified & original description: CDS=1-579 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0247.g026716 ATEP3, EP3,... not classified & original description: CDS=1-465 0.04 OrthoFinder output from all 47 species
Sam_g00455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo138198 CHI No description available 0.03 OrthoFinder output from all 47 species
Smo426710 No alias Endochitinase A OS=Zea mays 0.03 OrthoFinder output from all 47 species
Smo446851 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Solyc02g082960.3.1 HCHIB, B-CHI,... Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc07g009510.1.1 HEL, PR4, PR-4,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g055800.2.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc10g055810.2.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Spa_g10006 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025447_P001 Zm00001e025447 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e027534_P001 Zm00001e027534 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e030152_P001 HCHIB, B-CHI,... Basic endochitinase A OS=Secale cereale... 0.04 OrthoFinder output from all 47 species
Zm00001e041138_P001 ATEP3, EP3,... Endochitinase B (Fragment) OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 17 167
No external refs found!