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  5. GSVIVT01028250001

GSVIVT01028250001


Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase


Gene families : OG0001971 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001971_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028250001

Target Alias Description ECC score Gene Family Method Actions
AT3G62120 No alias Class II aaRS and biotin synthetases superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g010533 No alias proline-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05302 No alias proline-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001576.14 OVA6, PRORS1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001576.15 OVA6, PRORS1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Cre10.g429100 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Dac_g15024 No alias proline-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02781 No alias proline-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00716 No alias proline-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35792 No alias proline-tRNA ligase 0.05 OrthoFinder output from all 47 species
LOC_Os12g25710.1 LOC_Os12g25710 proline-tRNA ligase 0.05 OrthoFinder output from all 47 species
MA_8321978g0010 No alias Proline--tRNA ligase, cytoplasmic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g03194 No alias proline-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g068320.3.1 Solyc06g068320 proline-tRNA ligase 0.04 OrthoFinder output from all 47 species
Spa_g09904 No alias proline-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15505 No alias proline-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007170_P001 Zm00001e007170 proline-tRNA ligase 0.05 OrthoFinder output from all 47 species
Zm00001e024670_P003 Zm00001e024670 proline-tRNA ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR004154 Anticodon-bd 321 417
IPR016061 Pro-tRNA_ligase_II_C 444 516
IPR002314 aa-tRNA-synt_IIb 136 302
No external refs found!