GSVIVT01029158001 (TCH4, XTH22)

Aliases : TCH4, XTH22

Description : Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana

Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01029158001
Cluster	HCCA: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
AT4G25810	XTR6, XTH23	xyloglucan endotransglycosylase 6	0.06	OrthoFinder output from all 47 species
AT4G30280	XTH18, ATXTH18	xyloglucan endotransglucosylase/hydrolase 18	0.05	OrthoFinder output from all 47 species
AT5G57560	TCH4, XTH22	Xyloglucan endotransglucosylase/hydrolase family protein	0.07	OrthoFinder output from all 47 species
Aev_g17155	XTR3, XTH25	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g67344	TCH4, XTH22	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.20G001400.1	XTR7, XTH15,...	EC_2.4 glycosyltransferase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.20G001500.1	XTR7, XTH15,...	EC_2.4 glycosyltransferase & original description:...	0.04	OrthoFinder output from all 47 species
Dde_g38550	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Gb_10644	XTH6	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Gb_25347	XTR7, XTH15	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	OrthoFinder output from all 47 species
MA_10429607g0010	XTR7, XTH15	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.04	OrthoFinder output from all 47 species
MA_10430703g0010	XTR6, XTH23	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.03	OrthoFinder output from all 47 species
MA_10432086g0020	XTR6, XTH23	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.08	OrthoFinder output from all 47 species
Solyc03g093110.3.1	XTR6, XTH23,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
Solyc03g093130.3.1	XTR6, XTH23,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Solyc07g056000.2.1	XTR7, XTH15,...	Xyloglucan endotransglucosylase/hydrolase protein 15...	0.02	OrthoFinder output from all 47 species
Solyc09g092520.3.1	XTH16, Solyc09g092520	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.04	OrthoFinder output from all 47 species
Solyc12g017240.2.1	XTR7, XTH15,...	Xyloglucan endotransglucosylase/hydrolase protein 15...	0.04	OrthoFinder output from all 47 species
Zm00001e007028_P001	MERI5B, XTH24,...	Xyloglucan endotransglucosylase/hydrolase protein 24...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000757	GH16	2	134
IPR010713	XET_C	154	196

External Links

No external refs found!

GSVIVT01029158001 (TCH4, XTH22)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation