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  5. GSVIVT01029221001

GSVIVT01029221001 (RBCS1A)


Aliases : RBCS1A

Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo dimer.small subunit


Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029221001

Target Alias Description ECC score Gene Family Method Actions
Aop_g68980 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Cba_g37481 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Dde_g46369 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Lfl_g32549 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Msp_g41232 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Msp_g43344 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Msp_g43345 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Nbi_g37786 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Pp3c4_11770V3.1 RBCS1A, Pp3c4_11770 Ribulose bisphosphate carboxylase (small chain) family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015406 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Solyc07g017950.3.1 RBCS1A, Solyc07g017950 small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000894 RuBisCO_ssu_dom 59 166
No external refs found!