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  5. GSVIVT01029311001

GSVIVT01029311001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029311001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
AMTR_s00102p00056000 ATBHLH029,... Nutrient uptake.iron uptake.reduction-based strategy... 0.04 OrthoFinder output from all 47 species
AT4G29930 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g024935 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09875 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08956 SCRM2, ICE2 transcriptional regulator *(DYT1/AMS) & original... 0.02 OrthoFinder output from all 47 species
Aop_g10976 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08716.t1 Aspi01Gene08716 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G058800.1 Ceric.29G058800 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g31412 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07016 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g09255 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19595 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_36380 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os04g23550.1 LOC_Os04g23550 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_10427394g0020 ATICE1, ICE1, SCRM transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_196213g0010 SCRM2, ICE2 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_28638g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_86748g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g45924 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07324 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g014590.3.1 Solyc05g014590 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Spa_g04989 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09017 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14981 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24450 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29801 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040186_P002 Zm00001e040186 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Zm00001e040675_P003 Zm00001e040675 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 54 97
No external refs found!