GSVIVT01030133001

Description : Cell wall.pectin.xylogalacturonan.synthesis.xylogalacturonan xylosyltransferase

Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01030133001
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00046p00173940	evm_27.TU.AmTr_v1...	Cell...	0.03	OrthoFinder output from all 47 species
AMTR_s00046p00183980	evm_27.TU.AmTr_v1...	Cell...	0.04	OrthoFinder output from all 47 species
AT5G03795	No alias	Exostosin family protein	0.04	OrthoFinder output from all 47 species
AT5G20260	No alias	Exostosin family protein	0.03	OrthoFinder output from all 47 species
Aev_g40139	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g45051	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_02335	No alias	xylogalacturonan xylosyltransferase	0.04	OrthoFinder output from all 47 species
LOC_Os07g09050.1	LOC_Os07g09050	xylogalacturonan xylosyltransferase	0.03	OrthoFinder output from all 47 species
MA_93211g0010	No alias	Probable glycosyltransferase At5g03795 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp1g12090.1	No alias	Probable glycosyltransferase At5g03795 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp1g12100.1	No alias	Probable glycosyltransferase At5g03795 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Ppi_g32459	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo229884	No alias	Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Solyc07g045120.2.1	Solyc07g045120	xylogalacturonan xylosyltransferase	0.03	OrthoFinder output from all 47 species
Solyc08g066690.4.1	Solyc08g066690	Probable glycosyltransferase At5g03795 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc09g008720.3.1	Solyc09g008720	xylogalacturonan xylosyltransferase	0.02	OrthoFinder output from all 47 species
Solyc12g062940.3.1	Solyc12g062940	Probable glycosyltransferase At5g03795 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e036361_P001	Zm00001e036361	xylogalacturonan xylosyltransferase	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006486	protein glycosylation	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019446	BMT5-like	21	187
IPR004263	Exostosin	306	584

External Links

No external refs found!

GSVIVT01030133001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation