1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01030534001

GSVIVT01030534001


No description available


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030534001
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G20670 No alias Protein of unknown function (DUF506) 0.05 OrthoFinder output from all 47 species
Adi_g020142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g106449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g31928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11667 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g63912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g55983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.03 OrthoFinder output from all 47 species
Ceric.13G087600.1 Ceric.13G087600 not classified & original description: pacid=50635474... 0.06 OrthoFinder output from all 47 species
Dde_g01519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003141001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_30160 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_40428 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g25020.1 LOC_Os11g25020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g29070 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10428855g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_132127g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_29449g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_32290g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_373131g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_41471g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9190749g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp2g23680.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g37886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo129774 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g078150.4.1 Solyc02g078150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g006410.3.1 Solyc03g006410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g005480.3.1 Solyc06g005480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g06813 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011452_P001 Zm00001e011452 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019800_P002 Zm00001e019800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006571 tyrosine biosynthetic process IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 21 128
No external refs found!