1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01030589001

GSVIVT01030589001


Description : Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type)


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030589001
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00178100 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
AT1G15180 No alias MATE efflux family protein 0.06 OrthoFinder output from all 47 species
AT5G10420 No alias MATE efflux family protein 0.03 OrthoFinder output from all 47 species
AT5G38030 No alias MATE efflux family protein 0.02 OrthoFinder output from all 47 species
Ala_g27947 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01145.t1 Aspi01Gene01145 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G079800.1 Ceric.02G079800 metabolite transporter *(DTX) & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g17055 No alias metabolite transporter *(DTX) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01004077001 No alias Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
GSVIVT01004078001 No alias Solute transport.carrier-mediated transport.MOP... 0.05 OrthoFinder output from all 47 species
GSVIVT01014309001 ALF5 Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
GSVIVT01029134001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g48040.1 LOC_Os05g48040 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
LOC_Os08g43654.1 LOC_Os08g43654 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Len_g57573 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04109 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
MA_20558g0020 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_2948g0010 DTX35, FFT, ATDTX35 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Solyc05g013470.4.1 Solyc05g013470 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Tin_g17338 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002597_P001 Zm00001e002597 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e004873_P001 Zm00001e004873 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Zm00001e012504_P001 Zm00001e012504 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e014159_P001 Zm00001e014159 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Zm00001e020141_P001 Zm00001e020141 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Zm00001e022499_P002 Zm00001e022499 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e035104_P001 Zm00001e035104 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006855 xenobiotic transmembrane transport IEA Interproscan
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 293 453
IPR002528 MATE_fam 71 231
No external refs found!