1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01031112001

GSVIVT01031112001 (IDD2, AtIDD2)


Aliases : IDD2, AtIDD2

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031112001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00106830 IDD2, AtIDD2,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT1G25250 IDD16, AtIDD16 indeterminate(ID)-domain 16 0.03 OrthoFinder output from all 47 species
AT1G55110 AtIDD7, IDD7 indeterminate(ID)-domain 7 0.04 OrthoFinder output from all 47 species
AT5G44160 NUC C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
Adi_g028548 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g079392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117237 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g07600 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g22280 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g22616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37976 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene21463.t1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23688.t1 MGP, Aspi01Gene23688 C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene57591.t1 MGP, Aspi01Gene57591 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G056300.1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g32612 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g17431 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g29791 AtIDD12, IDD12 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01009680001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.08 OrthoFinder output from all 47 species
GSVIVT01025166001 JKD RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
LOC_Os01g14010.1 MGP, LOC_Os01g14010 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os01g70870.1 IDD2, AtIDD2,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os09g27650.2 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Lfl_g30618 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g33896 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g20764 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g31074 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016076 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo9109 IDD14, AtIDD14 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Solyc03g121660.3.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc06g075250.3.1 JKD, Solyc06g075250 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc11g069240.2.1 Solyc11g069240 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g29597 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g39904 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004751_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e018716_P001 MGP, Zm00001e018716 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e025973_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e026143_P001 MGP, Zm00001e026143 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e034317_P001 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 87 109
No external refs found!