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  5. GSVIVT01031124001

GSVIVT01031124001 (ATKRS-1)


Aliases : ATKRS-1

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase


Gene families : OG0007893 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031124001

Target Alias Description ECC score Gene Family Method Actions
Adi_g020711 RECQSIM not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14143 RECQSIM not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30518 RECQSIM not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22554 RECQSIM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08571 RECQSIM not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41127 RECQSIM not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027506_P001 RECQSIM, Zm00001e027506 ATP-dependent DNA helicase Q-like SIM OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004364 Aa-tRNA-synt_II 1168 1517
IPR004365 NA-bd_OB_tRNA 1045 1124
IPR011545 DEAD/DEAH_box_helicase_dom 157 321
IPR032284 RecQ_Zn-bd 601 656
IPR001650 Helicase_C 481 584
No external refs found!