Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor
Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01031461001 | |
| Cluster | HCCA: Cluster_92 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G02030 | No alias | C2H2-like zinc finger protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G03510 | No alias | C2H2-type zinc finger family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g108538 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12593 | No alias | regulatory protein *(DAZ) of male germ cell division &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene55657.t1 | Aspi01Gene55657 | regulatory protein *(DAZ) of male germ cell division &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0152.g053433 | No alias | C2H2-type subclass ZAT transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0577.g078251 | No alias | regulatory protein *(DAZ) of male germ cell division &... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g57790.1 | LOC_Os02g57790 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Len_g29819 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_23050g0010 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g41772 | No alias | regulatory protein *(DAZ) of male germ cell division &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10484 | No alias | regulatory protein *(DAZ) of male germ cell division &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g060740.3.1 | Solyc06g060740 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g075780.3.1 | Solyc06g075780 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g008440.1.1 | Solyc09g008440 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g57323 | No alias | regulatory protein *(DAZ) of male germ cell division &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019350_P001 | Zm00001e019350 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
