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  5. GSVIVT01031528001

GSVIVT01031528001


Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031528001

Target Alias Description ECC score Gene Family Method Actions
Adi_g077367 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24453 ATWBC11, ABCG11,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27208 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06000 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15684 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14218 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16729 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31653 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15273 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g73299 ATWBC11, ABCG11,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G101300.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G053900.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g09671 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13604 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22000 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36998 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16742 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Len_g41025 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436774g0020 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_6104g0010 No alias ABC transporter G family member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g14599 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58472 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g09330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g072090.3.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Spa_g16828 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16829 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26365 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004489_P001 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e006437_P002 Zm00001e006437 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 859 1010
IPR003439 ABC_transporter-like_ATP-bd 1508 1659
IPR003439 ABC_transporter-like_ATP-bd 198 347
IPR013525 ABC_2_trans 1822 2032
IPR013525 ABC_2_trans 1174 1386
IPR013525 ABC_2_trans 513 726
No external refs found!