Aliases : TIF3H1
Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3h component
Gene families : OG0004382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004382_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01031659001 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00087p00135370 | TIF3H1,... | Protein biosynthesis.translation... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G10840 | TIF3H1 | translation initiation factor 3 subunit H1 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g031312 | TIF3H1 | component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02099 | TIF3H1 | component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene20701.t1 | TIF3H1, Aspi01Gene20701 | component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15218 | TIF3H1 | component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15219 | TIF3H1 | component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Cre16.g676314 | TIF3H1 | Protein biosynthesis.translation... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g30780.1 | TIF3H1, LOC_Os04g30780 | component eIF3h of eIF3 mRNA-to-PIC binding complex | 0.08 | OrthoFinder output from all 47 species | |
| MA_32338g0010 | TIF3H1 | component eIF3h of eIF3 mRNA-to-PIC binding complex | 0.06 | OrthoFinder output from all 47 species | |
| Mp3g20490.1 | TIF3H1 | component eIF3h of eIF3 mRNA-to-PIC binding complex | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g09311 | TIF3H1 | component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c6_17230V3.1 | TIF3H1, Pp3c6_17230 | translation initiation factor 3 subunit H1 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11391 | No alias | component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Smo153526 | TIF3H1 | Protein biosynthesis.translation... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g098280.3.1 | TIF3H1, Solyc09g098280 | component eIF3h of eIF3 mRNA-to-PIC binding complex | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g10694 | TIF3H1 | component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e040713_P002 | TIF3H1, Zm00001e040713 | component eIF3h of eIF3 mRNA-to-PIC binding complex | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | HCCA |
| MF | GO:0030515 | snoRNA binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000555 | JAMM/MPN+_dom | 23 | 126 |
| No external refs found! |
