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  5. GSVIVT01031720001

GSVIVT01031720001 (PUB26)


Aliases : PUB26

Description : U-box domain-containing protein 26 OS=Arabidopsis thaliana


Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031720001
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00130440 CMPG2, ATCMPG2,... Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
AMTR_s00138p00053700 evm_27.TU.AmTr_v1... U-box domain-containing protein 21 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G19380 PUB25 plant U-box 25 0.03 OrthoFinder output from all 47 species
AT3G52450 PUB22 plant U-box 22 0.05 OrthoFinder output from all 47 species
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.07 OrthoFinder output from all 47 species
Adi_g003285 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054744 PUB25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077173 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077174 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077175 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107693 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02169 PUB23 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02974 PUB23 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15461 CMPG2, ATCMPG2 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16119 PUB25 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18167 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21197 PUB25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38062 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11423 PUB15 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12714 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30969 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61569 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62359 PUB26 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g11371 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12417 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04412 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15171.t1 PUB29, ATPUB29,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18444.t1 PUB23, Aspi01Gene18444 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18452.t1 PUB25, Aspi01Gene18452 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18453.t1 PUB25, Aspi01Gene18453 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18467.t1 PUB23, Aspi01Gene18467 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19351.t1 Aspi01Gene19351 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27391.t1 PUB26, Aspi01Gene27391 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44809.t1 PUB25, Aspi01Gene44809 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51624.t1 PUB15, Aspi01Gene51624 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038964 PUB25 U-Box-group-III E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043747 PUB26 not classified & original description: CDS=1-1407 0.04 OrthoFinder output from all 47 species
Ceric.10G007700.1 PUB23, Ceric.10G007700 not classified & original description: pacid=50612519... 0.07 OrthoFinder output from all 47 species
Ceric.19G059800.1 PUB26, Ceric.19G059800 not classified & original description: pacid=50575490... 0.03 OrthoFinder output from all 47 species
Dac_g01592 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10662 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29374 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01209 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01521 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11691 PUB26 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g26825 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01464 PUB26 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26516 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03660 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06700 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14303 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21913 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026769001 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_02629 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_13090 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_16227 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_17119 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_19502 PUB23 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_26429 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_27794 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g33680.1 CMPG2, ATCMPG2,... U-box domain-containing protein 29 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g34410.1 PUB25, LOC_Os02g34410 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g34030.1 PUB23, LOC_Os04g34030 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g13870.1 LOC_Os06g13870 U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g01213 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31416 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01311 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
MA_10430196g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10432179g0010 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10432981g0010 PUB22 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_1663g0020 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_17715g0010 CMPG1, ATCMPG1 U-box domain-containing protein 20 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_311559g0010 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_33190g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_415344g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_5536318g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_58844g0020 PUB22 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_779502g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_84154g0010 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_95662g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g06090.1 PUB25 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Mp3g01700.1 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g11730.1 PUB25 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Mp7g11000.1 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp7g11020.1 PUB25 E3 ubiquitin ligase (PUB) 0.06 OrthoFinder output from all 47 species
Msp_g11599 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38744 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47390 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06628 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08919 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10378 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29206 PUB25 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29544 PUB23 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36530 PUB23 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42463 PUB23 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g12470 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g34239 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g00718 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12004 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19356 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18199 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002717 PUB26 not classified & original description: CDS=1-1404 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015794 PUB26 U-Box-group-III E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Smo403954 PUB25 U-box domain-containing protein 25 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo414754 PUB25 U-box domain-containing protein 75 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Smo416356 PUB26 U-box domain-containing protein 30 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g007000.4.1 PUB22, Solyc01g007000 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc01g007010.2.1 PUB22, Solyc01g007010 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc01g007020.4.1 PUB23, Solyc01g007020 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g007030.3.1 PUB22, Solyc01g007030 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc01g007040.4.1 PUB22, Solyc01g007040 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc01g107980.3.1 PUB26, Solyc01g107980 U-box domain-containing protein 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g008100.3.1 Solyc04g008100 U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g071030.1.1 Solyc04g071030 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Spa_g03410 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30474 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06727 PUB26 U-Box-group-III E3 ubiquiTin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007109_P001 PUB23, Zm00001e007109 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e014766_P001 CMPG2, ATCMPG2,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Zm00001e014779_P001 PUB26, Zm00001e014779 U-box domain-containing protein 26 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e022698_P001 PUB26, Zm00001e022698 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e039417_P001 PUB23, Zm00001e039417 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 64 135
No external refs found!