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  5. GSVIVT01031916001

GSVIVT01031916001


Description : UPF0496 protein At4g34320 OS=Arabidopsis thaliana


Gene families : OG0002926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031916001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00142910 evm_27.TU.AmTr_v1... Cytoskeleton.cytoskeleton-plasma membrane-cell wall... 0.04 OrthoFinder output from all 47 species
AT5G66675 No alias Protein of unknown function (DUF677) 0.09 OrthoFinder output from all 47 species
Als_g11323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41885.t1 Aspi01Gene41885 integrin-like protein *(AT14a) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11081 No alias integrin-like protein *(AT14a) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g12420 No alias integrin-like protein *(AT14a) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g03774 No alias integrin-like protein *(AT14a) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g10240.2 LOC_Os03g10240 integrin-like protein (AT14a) 0.03 OrthoFinder output from all 47 species
LOC_Os10g21540.1 LOC_Os10g21540 integrin-like protein (AT14a) 0.03 OrthoFinder output from all 47 species
Mp1g08020.1 No alias integrin-like protein (AT14a) 0.03 OrthoFinder output from all 47 species
Msp_g10983 No alias integrin-like protein *(AT14a) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g09092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10738 No alias integrin-like protein *(AT14a) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03839 No alias integrin-like protein *(AT14a) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g039740.3.1 Solyc11g039740 integrin-like protein (AT14a) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR007749 DUF677 75 192
No external refs found!