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  5. GSVIVT01031953001

GSVIVT01031953001 (ATRAB7B, RAB7B,...)


Aliases : ATRAB7B, RAB7B, ATRABG3F, RAB71, RABG3F

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.G-class RAB GTPase


Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031953001
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Adi_g021271 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05707 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0307.g063993 AtRABG3d, RABG3d G-class RAB GTPase & original description: CDS=107-727 0.04 OrthoFinder output from all 47 species
Cba_g37396 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G031900.1 ATRAB7B, RAB7B,... G-class RAB GTPase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g04092 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47846 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g51700.1 ATRABG3B,... G-class RAB GTPase 0.07 OrthoFinder output from all 47 species
Lfl_g08054 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g13820.1 AtRABG3d, RABG3d G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Msp_g03381 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06063 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00597 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48536 No alias G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12567 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04335 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e032146_P002 ATRAB7B, RAB7B,... G-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 57 224
No external refs found!