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  5. GSVIVT01032268001

GSVIVT01032268001


Description : TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana


Gene families : OG0000975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032268001
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00212090 evm_27.TU.AmTr_v1... TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT2G07170 No alias ARM repeat superfamily protein 0.16 OrthoFinder output from all 47 species
AT4G27060 TOR1, CN, SPR2 ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G62580 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene50709.t1 TOR1, CN, SPR2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1899.g107904 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
Cba_g73037 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ehy_g07055 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Gb_39526 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g38710.2 LOC_Os09g38710 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.22 OrthoFinder output from all 47 species
Lfl_g11054 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.05 OrthoFinder output from all 47 species
MA_102352g0010 TOR1, CN, SPR2 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
MA_10436002g0010 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.03 OrthoFinder output from all 47 species
MA_197466g0010 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.02 OrthoFinder output from all 47 species
MA_20584g0010 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Msp_g14210 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ppi_g31226 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022215 TOR1, CN, SPR2 not classified & original description: CDS=696-3455 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0177.g024637 TOR1, CN, SPR2 not classified & original description: CDS=1-4446 0.03 OrthoFinder output from all 47 species
Solyc03g113680.4.1 Solyc03g113680 TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g042580.3.1 Solyc07g042580 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Tin_g05648 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Zm00001e034876_P002 Zm00001e034876 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Zm00001e035114_P002 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR026003 Cohesin_HEAT 103 127
No external refs found!