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  5. GSVIVT01032387001

GSVIVT01032387001


Description : Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032387001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00218010 evm_27.TU.AmTr_v1... Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
AT4G13070 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.04 OrthoFinder output from all 47 species
Adi_g008013 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17249 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11882 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09890 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11388 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G126500.1 Ceric.01G126500 splicing factor *(CFM9) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g01780 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39701 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11683 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18626 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12917 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g20030.1 LOC_Os06g20030 Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species
Len_g19656 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34609 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436523g0010 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.06 OrthoFinder output from all 47 species
Mp2g03710.1 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
Nbi_g10778 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29576 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s3404.g028763 No alias splicing factor *(CFM9) & original description: CDS=72-884 0.04 OrthoFinder output from all 47 species
Sam_g08828 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49602 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10764 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 149 233
No external refs found!