Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL10 | mtRPL10 component
Gene families : OG0005040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01032650001 | |
| Cluster | HCCA: Cluster_79 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G13510 | No alias | Ribosomal protein L10 family protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g084574 | No alias | component *(uL10) of organelle large ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04789 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g05054 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene48059.t1 | Aspi01Gene48059 | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G078900.1 | Ceric.20G078900 | component *(uL10c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Cre06.g272850 | No alias | Protein biosynthesis.organelle translation... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g03164 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03520 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_21730 | No alias | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g17580.1 | LOC_Os03g17580 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Mp4g07300.1 | No alias | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g00974 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g00675 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19831 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c1_1330V3.1 | Pp3c1_1330 | Ribosomal protein L10 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24954 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001284_P001 | Zm00001e001284 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e038440_P001 | Zm00001e038440 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005622 | intracellular anatomical structure | IEA | Interproscan |
| BP | GO:0042254 | ribosome biogenesis | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001790 | Ribosomal_L10P | 53 | 99 |
| No external refs found! |
